In order to design probes and primers for your microarray projects, you need to process a massive number of sequences and avoid cross homologies, which takes a considerable amount of time without the help of a specialized piece of software that can do it in a few minutes.
Perform online BLAST searches and design multiple probes
Array Designer is an application that greatly simplifies the probe and primer creation process for SNP detection projects, while also allowing you to perform optimized BLAST searches on local databases or by connecting directly to the NCBI. These searches ensure the signal fidelity and allow you to automatically avoid cross homologies for increased probe design optimization.
In addition, the created primers are optimized for identical PCR reaction conditions, while the probes can be designed in greater numbers per sequence, in order to increase the detection accuracy. The maximum length of a probe can reach 99bp and you can also create primers that amplify SNP sites.
Retrieve sequences online and export the results as spreadsheets
In order to include more sequences into your projects, you can either load them from a local computer, or connect to an online database such as Entrez or dbSNP and retrieve them using assay IDs and accession numbers. Furthermore, the supported file formats include the GenBank and FASTA extensions, which can also contain multiple sequences in the same document.
After you are done performing the desired searches, you can save the results and export them to an external file for further analysis, such as Microsoft Excel or Lotus 123. The spreadsheet form allows you to easily order and sort the desired values, as well as use them in a separate database or other piece of specialized software.
In conclusion
Although Array Designer is a very complex application aimed at experienced scientists working on large-scale projects, it does come with a lengthy and in-detail manual that explains how to make full use of the utility. In addition, you are provided with a quick tour presentation and various tutorials you can consult when you run into difficulties.

 

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Array Designer 4.20 Keygen Free

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www.genecards.org/product_detail.php?product_id=190

Version 3.5.0
Array Designer software allows you to design
high quality probes and primers for SNP
detection applications. You will be able to
search for the SNP at the allele level,
and create multiple probes that will ensure
detection for the SNP or SNP positions of
interest.
Array Designer is an online resource that
is easy to use, and is loaded with features.
These features include pre-designed primers,
multiple primer sets and probes that target
each position, and the ability to perform
multiple sets of primer/probe combinations
on each sequence.
All SNP detection applications have their
individual specific requirements. So, in order
to design primers and probes, you need to
process a massive number of sequences and
avoid cross homologies, which takes a
considerable amount of time without the help
of a specialized piece of software that can do
it in a few minutes.
Perform online BLAST searches and design
multiple probes and primers
Array Designer is an application that greatly
simplifies the probe and primer creation
process for SNP detection projects, while
also allowing you to perform optimized
BLAST searches on local databases or by
connecting directly to the NCBI. These
searches ensure the signal fidelity and allow
you to automatically avoid cross
homologies for increased probe design
optimization.
In addition, the created primers are
optimized for identical PCR reaction
conditions, while the probes can be
designed in greater numbers per sequence,
in order to increase the detection
accuracy. The maximum length of a probe
can reach 99bp and you can also create
primers that amplify SNP sites.
Retrieve sequences online and export the
results as spreadsheets
In order to include more sequences into
your projects, you can either load them from
a local computer, or connect to an online
database such as Entrez or dbSNP and
retrieve them using assay IDs and accession
numbers. Furthermore, the supported file
formats include the GenBank and FASTA
extensions, which can also contain multiple
sequ

Array Designer 4.20 Crack (Latest)

– Developed for the technical users for array probe design.
– Designed to help users in the design and the evaluation of the most efficient probe to capture the products of an amplification reaction.
– The main application will run a query in a local or a remote database and returns the results as Excel spreadsheets.
– It can process the files in the general FASTA format.
– This application supports any number of sequences and returns the results as sheets.
– It supports the conversion of the files from the FASTA format.
– The new version of the application can export its results into the Excel format.
– It provides information on the retrieved sequences
– Allows you to create up to 8 probes for each entry.
– You can also manage the SNPs.
– The maximum length of a probe is 99 bp
– You can create primers that amplify SNP sites.
– Customizable output:
– The final report is saved as an EXCEL file
– You can export the report as a CSV file.
– You can use the output of the application to create a database.
– Allows the user to design a database or to order and sort the desired columns.
– Allows the user to use in other applications.
– You can also automatically download the sequences from online databases.
– Allows the user to set the mismatch percentage of the probes.
– You can also convert the files to FASTA.
– It is possible to edit the probe sequences and control the probes.
– Allows the user to choose from a choice of columns to display in the report.
– You can select the depth of the BLAST search in the database.
– Allows the user to decide the parameter of the BLAST search for the primers.
– Allows the user to design the primers for a SNPs report.
– Allows the user to set the mismatch percentage of the primers.
– Allows the user to set the parameters of the BLAST search.
– Allows the user to set the result format.
– Allows the user to set the depth of the BLAST search in the database.
– Allows the user to set the parameters for the primers.
– Allows the user to select a certain number of sequences in a database.
– Allows the user to decide the output format.
– Allows the user to select the depth of the BLAST search.
– Allows the user to choose from a choice of primers.
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Array Designer 4.20 Crack +

The most important thing to remember when using Array Designer is that it is not an automated or batch-generating software. It is a powerful tool for a single-point-of-view customization of experiments that can be used for SNP detection projects. It is therefore intended to be used by experienced people who are more familiar with array-based projects than with the computer science behind the game. Nevertheless, the basic version is quite easy to use, while the paid and pro versions are extremely powerful and allow you to create much more efficient projects. The software works on Windows XP, Vista, 7 and 8, as well as on Macs.
The following are some of the features included in the free version of Array Designer:

Allows you to design multiple probes and primers per sequence, which increases the detection accuracy
Is optimized for use with BLAST, while also allowing you to perform online searches on the NCBI database.
Allows you to include a large number of sequences into your project (up to 2000)
Allows you to retrieve sequences online and export the results as spreadsheets, which can be easily used in other software
You are also provided with a quick tour presentation and several tutorials on how to perform various tasks, which will aid you in the use of the software

The following are some of the features included in the paid and pro versions:

Allows you to perform BLAST searches against the NCBI database, which helps you to avoid cross homologies for increased probe design optimization
Allows you to perform online BLAST searches and design primers/probes in greater numbers per sequence, which improves the accuracy of the signals
Allows you to include a large number of sequences into your project (up to 20,000)
Allows you to perform searches on the dbSNP database and save the results to a spreadsheet
You can also define your own customized databases and export the results as spreadsheets for further analysis
You can include a maximum number of 2000 sequences per file (when the Pro version is purchased)
Allows you to use local and remote files for fast scanning of new sequences
Allows you to include thousands of sequences for retrieval, and export the results to various spreadsheet and database formats
Allows you to work on multiple databases at the same time
Allows you to perform online searches of dbSNP database, BLAST searches against local databases and local sequence searches using an in-built program, which saves the results to a spreadsheet
Allows you to perform BLAST searches against custom databases
Allows you to perform local

What’s New in the Array Designer?

Array Designer allows you to design and optimize probes and primers for SNP detection projects, as well as search sequences in local databases or online. When using Array Designer, you can quickly search for sequences that contain a desired sequence motif, such as the specific SNP motifs detected by primers or probes designed for that motif. For instance, you can specify the primers or probes that flank the SNP site and that have six mismatches in their 3′-end over their 3′-end binding site in order to increase the selectivity of detection.
For this purpose, Array Designer offers an extensive database of over 500,000 sequences that can be searched for sequences containing your motif, and which can also be saved for retrieval later on. You can also limit the search to the whole genome, to a specific gene, to particular nucleotide sequences, or even to a specified chromosome. Furthermore, the application allows you to perform BLAST searches and save the results in the same database or in an external spreadsheet in order to save time.
Finally, the application allows you to save the sequences you have found and then import them into the application or export the results into a spreadsheet.
License:
This license is the GPL version 3. This means that you can do whatever you like with it. You can share it freely, or even sell it for a price if you so wish. If you intend to make money, then you must contact the array designer development team by email for a commercial license (this is included in the price).
Platform:
MacOS X
Price:
$109.95 USD

Description:
VortexSNP provides a simple, straightforward and powerful tool for analyzing variations in DNA sequences. It offers a vast number of features and functions that allow you to edit, evaluate and compare the characteristics of DNA sequences of interest.
VortexSNP was designed to be very intuitive and easy to use. Its combination of three main components – functions, features and functionalities – are all laid out in an intuitive and clean interface. Furthermore, a help file is included with each tool to explain its different functions and features.

License:
VortexSNP is covered by the GNU General Public License version 3 (GPLv3). This means that you can do whatever you like with it. You can share it freely, or even sell it for a price if you so wish. If you intend to make money, then you must contact the vortex software development team by email for a commercial license (this is included in the price).
Platform:
MacOS X
Price:
$39.95 USD

Description:
Oligo 5.1 is a powerful and easy to use database containing the entire contents of the NCBI GenBank database, and which can be searched for primer and probe sequences. The included database contains 5,000,000 sequences and can be updated every month with over 5,000 new sequences.

System Requirements For Array Designer:

Minimum system requirements for the game are as follows:
OS: Windows Vista/Windows 7
Processor: 2.8 GHz dual-core CPU
Memory: 2 GB
Graphics: 1GB Video card
DirectX: Version 9.0
Hard Drive Space: 1.5 GB
Sound Card: DirectX Compatible Soundcard
Additional Notes:
Audio: DirectX Compatible audio system is required, such as X-Fi, MSX, Soundblaster, or Creative Labs, or any other sound card and audio software

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